STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63612.1Amine dehydrogenase. (409 aa)    
Predicted Functional Partners:
AFK63610.1
Amine dehydrogenase; Belongs to the aromatic amine dehydrogenase light chain family.
 
 
 0.998
AFK63611.1
Methylamine utilization MauE.
 
   
 0.954
AFK63168.1
Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase.
 
 
 0.945
gfa
Glutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.
     
 0.900
AFK63609.1
COG1858 Cytochrome c peroxidase.
 
 
 0.777
AFK62199.1
Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase.
  
 
 
 0.735
AFK63613.1
Hypothetical protein.
     
 0.678
AFK63616.1
Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase.
  
 
 
 0.674
AFK61366.1
Hypothetical protein; COG2822 Predicted periplasmic lipoprotein involved in iron transport.
   
   0.595
AFK63607.1
Methylamine utilization protein mauL.
   
   0.595
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.