STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63641.1Amino acid-binding periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family. (340 aa)    
Predicted Functional Partners:
AFK61638.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.962
AFK61637.1
COG4597 ABC-type amino acid transport system, permease component.
 
 
 0.959
AFK61636.1
L-amino acid ABC transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
  
 
0.901
AFK63408.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.501
AFK61578.1
Amino-acid ABC transporter ATP binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.497
AFK63639.1
DedA family protein; COG0586 Uncharacterized membrane-associated protein.
       0.443
AFK63640.1
Hypothetical protein; COG0586 Uncharacterized membrane-associated protein.
       0.443
AFK63386.1
Glutamate and aspartate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.441
AFK63642.1
Ferrichrome transport ATP-binding protein fhuC; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
       0.425
AFK64236.1
Amino acids ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.420
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.