STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63683.1Transporter; COG0477 Permeases of the major facilitator superfamily. (457 aa)    
Predicted Functional Partners:
AFK64316.1
Membrane transport protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.552
AFK63600.1
COG0477 Permeases of the major facilitator superfamily.
 
   
 0.546
AFK63969.1
Sugar transporter family protein 8; COG0477 Permeases of the major facilitator superfamily.
  
     0.523
AFK61895.1
Citrate:proton symporter; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.494
AFK63681.1
Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.483
AFK63605.1
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.468
AFK63312.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.460
AFK63152.1
COG0477 Permeases of the major facilitator superfamily.
  
   
 0.447
AFK64129.1
Gamma-aminobutyrate transport protein, rpos-dependent (apc family); COG1113 Gamma-aminobutyrate permease and related permeases.
  
   
 0.440
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.