STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63750.1Aldehyde dehydrogenase; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs. (660 aa)    
Predicted Functional Partners:
AFK63751.1
COG2010 Cytochrome c, mono- and diheme variants.
  
 0.994
AFK63749.1
COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
  
  0.980
AFK60894.1
Gluconate 2-dehydrogenase; COG2010 Cytochrome c, mono- and diheme variants.
 
  
 0.933
AFK61621.1
COG2010 Cytochrome c, mono- and diheme variants.
 
  
 0.919
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
     
  0.900
AFK63349.1
Nicotinamidase; COG1335 Amidases related to nicotinamidase.
     
  0.900
AFK60837.1
Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T).
  
     0.734
AFK63746.1
Peptidase M29 family protein; COG2309 Leucyl aminopeptidase (aminopeptidase T).
  
     0.733
AFK60906.1
Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T).
  
     0.730
AFK60835.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.691
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.