STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63776.1COG1960 Acyl-CoA dehydrogenases. (380 aa)    
Predicted Functional Partners:
AFK62965.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.966
AFK62286.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 0.953
AFK61480.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.952
AFK61087.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.950
AFK61031.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.942
AFK64089.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.941
AFK63779.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.888
AFK63777.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.867
AFK63778.1
Coenzyme A transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
  
  
 0.791
AFK63398.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.773
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.