STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63807.1COG1960 Acyl-CoA dehydrogenases. (389 aa)    
Predicted Functional Partners:
AFK63808.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.975
AFK63809.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 0.970
AFK63296.1
COG1960 Acyl-CoA dehydrogenases.
  
  
  0.964
AFK63388.1
Beta-ketoadipyl CoA thiolase; COG0183 Acetyl-CoA acetyltransferase.
  
 0.937
AFK61074.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
 
 0.925
AFK60994.1
COG1960 Acyl-CoA dehydrogenases.
  
  
 
0.923
AFK62177.1
COG1960 Acyl-CoA dehydrogenases.
  
  
 
0.923
AFK64517.1
COG1960 Acyl-CoA dehydrogenases.
  
  
 
0.917
putA
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; COG0506 Proline dehydrogenase.
  
 
 0.908
AFK62965.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.906
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.