STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63878.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
AFK63877.1
Cytochrome C assembly family protein; COG4137 ABC-type uncharacterized transport system, permease component.
  
    0.887
AFK63879.1
N-acetyl-anhydromuranmyl-L-alanine amidase; COG3023 Negative regulator of beta-lactamase expression.
       0.768
AFK60842.1
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
   0.595
AFK61672.1
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
   0.595
AFK62483.1
Iron binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
   
    0.447
AFK61365.1
COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport.
  
  
 0.443
AFK62079.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
     
 0.414
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.