STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63983.1Filamentous hemagglutinin family outer membrane protein; COG3210 Large exoproteins involved in heme utilization or adhesion. (313 aa)    
Predicted Functional Partners:
AFK63985.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
      0.976
AFK63984.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.773
AFK63986.1
COG2831 Hemolysin activation/secretion protein.
  
 
 0.727
AFK62468.1
Esterase; COG2755 Lysophospholipase L1 and related esterases.
  
 
 0.580
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.