STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64019.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AFK64020.1
Hypothetical protein.
     0.989
AFK64025.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.794
AFK64023.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.769
AFK64021.1
Peptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
     
 0.768
AFK64022.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
     
 0.768
AFK64024.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.768
AFK64026.1
4-phytase; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.730
AFK62793.1
Transferase; COG2236 Predicted phosphoribosyltransferases.
  
     0.490
AFK64027.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
     
 0.463
AFK64029.1
Hypothetical protein.
 
     0.412
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.