STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64077.1Asp/Glu/hydantoin racemase; COG3473 Maleate cis-trans isomerase. (242 aa)    
Predicted Functional Partners:
maiA
Asp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
  
  
  0.967
AFK64078.1
Phenylhydantoinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
     0.934
AFK60907.1
Isochorismatase hydrolase; COG1335 Amidases related to nicotinamidase.
 
  
 0.926
AFK60838.1
COG1335 Amidases related to nicotinamidase.
 
  
 0.925
AFK64079.1
COG4126 Hydantoin racemase.
 
     0.923
AFK63745.1
COG1335 Amidases related to nicotinamidase.
 
  
 0.920
sdhA
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.902
AFK61170.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
     
  0.900
sdhB
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
  0.900
AFK63257.1
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
     
  0.900
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.