STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64140.1Transcriptional regulator family protein 20; COG1414 Transcriptional regulator. (268 aa)    
Predicted Functional Partners:
AFK61466.1
COG1414 Transcriptional regulator.
  
     0.775
AFK64218.1
COG1414 Transcriptional regulator.
  
     0.772
AFK62439.1
COG1414 Transcriptional regulator.
  
     0.769
AFK64293.1
COG1414 Transcriptional regulator.
  
     0.765
AFK63306.1
COG1414 Transcriptional regulator.
  
     0.764
AFK61186.1
COG1414 Transcriptional regulator.
  
     0.762
AFK62176.1
COG1414 Transcriptional regulator.
  
     0.743
AFK60968.1
COG1414 Transcriptional regulator.
  
     0.708
AFK61030.1
COG1414 Transcriptional regulator.
  
     0.615
AFK62811.1
COG1414 Transcriptional regulator.
  
     0.559
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.