STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64147.1Cobaltochelatase; COG0714 MoxR-like ATPases. (326 aa)    
Predicted Functional Partners:
AFK64146.1
Cobaltochelatase subunit CobT; COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase).
 
 
 0.996
AFK61246.1
Cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.900
AFK62139.1
Sulfur oxidation protein 1.
  
  
 0.697
AFK64148.1
COG1414 Transcriptional regulator.
 
    0.696
AFK64154.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.670
AFK64156.1
SnoaL-like domain containing protein.
 
     0.659
AFK64150.1
COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
 
     0.618
AFK64149.1
COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
 
     0.543
AFK64155.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.504
AFK61288.1
Hydrolase; COG1011 Predicted hydrolase (HAD superfamily).
 
   
 0.469
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.