STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64209.1ABC transporter-like protein; COG4619 ABC-type uncharacterized transport system, ATPase component. (213 aa)    
Predicted Functional Partners:
AFK63449.1
COG1118 ABC-type sulfate/molybdate transport systems, ATPase component.
  
     0.716
tsaD
UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
     0.650
AFK62124.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
     0.629
glnQ
Glutamine ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
  
     0.618
AFK64217.1
COG2214 DnaJ-class molecular chaperone.
 
     0.606
AFK63565.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
  
     0.586
AFK64506.1
COG0480 Translation elongation factors (GTPases).
  
     0.583
ksgA
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
     0.567
AFK62723.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
  
     0.566
AFK61902.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
  
     0.558
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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