STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64226.1Phenylacetic acid degradation protein PaaI; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. (149 aa)    
Predicted Functional Partners:
AFK64227.1
Efflux protein; COG0534 Na+-driven multidrug efflux pump.
 
    0.646
AFK61445.1
phenylacetate-CoA ligase; COG1541 Coenzyme F390 synthetase.
 
  
 0.582
AFK61440.1
AMP-binding protein; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
 
   
 0.573
AFK63279.1
COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Belongs to the HIBADH-related family.
  
    0.496
AFK61444.1
Branched-chain amino acid transport system substrate-binding protein.
 
     0.481
AFK61441.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
     0.468
AFK61443.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.450
plsX
Putative phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.435
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.