STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64229.1Hypothetical protein; COG5553 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily. (196 aa)    
Predicted Functional Partners:
AFK64231.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
    0.989
AFK64230.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
       0.775
AFK64091.1
Cysteine dioxygenase type I; COG5553 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily.
  
     0.653
AFK64228.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.635
AFK61569.1
Hypothetical protein.
  
     0.549
AFK64232.1
Solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
       0.535
AFK61366.1
Hypothetical protein; COG2822 Predicted periplasmic lipoprotein involved in iron transport.
  
     0.478
AFK63635.1
Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.469
AFK61053.1
Acyl coenzyme A thioester hydrolase; COG1073 Hydrolases of the alpha/beta superfamily.
  
     0.445
AFK64214.1
COG0583 Transcriptional regulator.
  
     0.445
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.