STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64239.1COG3019 Predicted metal-binding protein. (97 aa)    
Predicted Functional Partners:
AFK64240.1
Heavy metal transport/detoxification protein; COG2608 Copper chaperone.
     
 0.484
AFK62079.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
   
 0.474
AFK62840.1
Putative cytochrome c4; COG2863 Cytochrome c553.
 
     0.464
AFK64374.1
COG2863 Cytochrome c553.
 
     0.456
AFK61507.1
COG0695 Glutaredoxin and related proteins.
 
     0.429
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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