STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64253.1COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (244 aa)    
Predicted Functional Partners:
AFK64252.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 0.999
AFK64251.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.813
AFK64254.1
Long-chain fatty acid:CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.788
AFK62297.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
  
 
 0.771
AFK63390.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
  
 
 0.771
AFK64198.1
Hypothetical protein.
  
     0.625
AFK63330.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
 
  
 0.517
AFK63328.1
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.467
AFK62767.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
 
  
 0.417
AFK63715.1
COG4829 Muconolactone delta-isomerase.
  
  
 0.415
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.