STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64267.1FkbM family methyltransferase; COG0500 SAM-dependent methyltransferases. (394 aa)    
Predicted Functional Partners:
AFK64274.1
Type 12 methyltransferase; COG4641 Uncharacterized protein conserved in bacteria.
  
 0.907
AFK64266.1
Hypothetical protein.
      0.891
AFK64280.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.731
AFK64260.1
COG3563 Capsule polysaccharide export protein.
  
  
 0.678
AFK61432.1
ABC transporter-like protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
  
 0.602
AFK64278.1
Polysaccharide ABC transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
  
 0.602
AFK61431.1
ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.587
AFK64279.1
Permease of an ABC exporter involved in polysaccharide export; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.587
AFK64264.1
Hypothetical protein.
  
  
 0.482
AFK64265.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
  
 0.482
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.