STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64280.1COG1596 Periplasmic protein involved in polysaccharide export. (276 aa)    
Predicted Functional Partners:
AFK64279.1
Permease of an ABC exporter involved in polysaccharide export; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.989
AFK64278.1
Polysaccharide ABC transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.979
AFK64260.1
COG3563 Capsule polysaccharide export protein.
 
  
 0.972
AFK64281.1
COG3524 Capsule polysaccharide export protein.
 
  
 0.966
AFK61432.1
ABC transporter-like protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
  
 0.867
AFK63860.1
Amidase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.787
AFK64282.1
COG3562 Capsule polysaccharide export protein.
 
   
 0.785
AFK64263.1
Mannose-1-phosphate guanylyltransferase-mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.746
AFK64267.1
FkbM family methyltransferase; COG0500 SAM-dependent methyltransferases.
  
  
 0.731
AFK61431.1
ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.710
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.