STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64293.1COG1414 Transcriptional regulator. (272 aa)    
Predicted Functional Partners:
AFK61161.1
COG1414 Transcriptional regulator.
  
     0.765
AFK64140.1
Transcriptional regulator family protein 20; COG1414 Transcriptional regulator.
  
     0.765
AFK63516.1
Transcriptional regulator family protein 6; COG1414 Transcriptional regulator.
  
     0.760
AFK62176.1
COG1414 Transcriptional regulator.
  
     0.759
AFK61466.1
COG1414 Transcriptional regulator.
  
     0.758
AFK64427.1
COG1414 Transcriptional regulator.
  
     0.757
AFK64218.1
COG1414 Transcriptional regulator.
  
     0.756
AFK60995.1
COG1414 Transcriptional regulator.
  
     0.754
AFK64100.1
Regulatory protein IclR; COG1414 Transcriptional regulator.
  
     0.754
AFK60814.1
Regulatory protein for pca operon (activator); COG1414 Transcriptional regulator.
  
     0.752
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.