STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64302.1COG3518 Uncharacterized protein conserved in bacteria. (184 aa)    
Predicted Functional Partners:
AFK64301.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.977
AFK61395.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.971
AFK64303.1
COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion.
 
    0.968
AFK64306.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.945
AFK64305.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.936
AFK64304.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
 
  
 0.923
AFK64307.1
Protein ImpA; COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.911
AFK61391.1
COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.906
AFK61394.1
Lipoprotein; COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.890
AFK61396.1
Type VI secretion-associated protein, BMA_A0400 family protein; COG3913 Uncharacterized protein conserved in bacteria.
 
  
 0.881
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.