STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64351.1OsmC family protein; COG1764 Predicted redox protein, regulator of disulfide bond formation. (171 aa)    
Predicted Functional Partners:
AFK64352.1
NAD-dependent epimerase/dehydratase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
       0.714
AFK64350.1
Putative ketoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
    0.601
AFK64353.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
     
 0.480
AFK64354.1
Cupin; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
       0.435
AFK62341.1
Hypothetical protein.
   
    0.433
AFK62808.1
Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
  
 0.422
AFK61509.1
OmpA/MotB domain protein; COG2913 Small protein A (tmRNA-binding).
   
  
 0.407
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.