STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64461.1COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase. (210 aa)    
Predicted Functional Partners:
AFK64462.1
COG3734 2-keto-3-deoxy-galactonokinase.
  
 0.999
AFK64460.1
2-dehydro-3-deoxygluconokinase; COG0524 Sugar kinases, ribokinase family.
 
  
 0.913
AFK64446.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
  
 
0.855
AFK64162.1
Galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
   
 0.724
AFK62905.1
L-alanine-DL-glutamate epimerase-like protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.690
AFK64204.1
2-keto-3-deoxygluconate permease.
 
  
 0.675
AFK60778.1
Mandelate racemase/muconate lactonizing protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
   
 0.567
AFK60782.1
Mandelate racemase/muconate lactonizing protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
   
 0.566
AFK63357.1
COG2186 Transcriptional regulators.
   
 0.549
AFK62727.1
COG2721 Altronate dehydratase.
 
  
 0.544
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.