STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64499.1COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis. (115 aa)    
Predicted Functional Partners:
AFK64498.1
Hypothetical protein.
 
     0.839
AFK64497.1
Putative glucose dehydrogenase subunit alpha; COG2303 Choline dehydrogenase and related flavoproteins.
 
     0.791
AFK64500.1
COG0346 Lactoylglutathione lyase and related lyases.
 
     0.696
AFK63638.1
COG0693 Putative intracellular protease/amidase.
 
   
 0.595
AFK61547.1
COG1609 Transcriptional regulators.
  
     0.417
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.