STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64516.1COG1960 Acyl-CoA dehydrogenases. (140 aa)    
Predicted Functional Partners:
AFK64517.1
COG1960 Acyl-CoA dehydrogenases.
     0.994
AFK64518.1
COG2079 Uncharacterized protein involved in propionate catabolism.
 
  
 0.764
AFK64515.1
Hypothetical protein.
 
    0.736
AFK64514.1
Hypothetical protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
 
  0.674
AFK61035.1
Hypothetical protein; COG1960 Acyl-CoA dehydrogenases.
  
     0.639
AFK63330.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
 
 
 0.591
AFK62965.1
COG2025 Electron transfer flavoprotein, alpha subunit.
  
 
 0.582
AFK62966.1
COG2086 Electron transfer flavoprotein, beta subunit.
  
 
 0.579
AFK63394.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.552
AFK62767.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
 
 
 0.511
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.