STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64532.1COG1802 Transcriptional regulators. (238 aa)    
Predicted Functional Partners:
AFK61941.1
COG1802 Transcriptional regulators.
  
     0.774
AFK63493.1
COG1802 Transcriptional regulators.
  
     0.774
AFK63785.1
COG1802 Transcriptional regulators.
  
     0.774
AFK63311.1
COG1802 Transcriptional regulators.
  
     0.772
AFK64016.1
COG1802 Transcriptional regulators.
  
     0.770
AFK63680.1
COG1802 Transcriptional regulators.
  
     0.769
AFK64080.1
COG1802 Transcriptional regulators.
  
     0.759
AFK64457.1
COG2186 Transcriptional regulators.
  
  
 0.754
AFK64168.1
COG2186 Transcriptional regulators.
  
  
 0.728
AFK61829.1
COG2186 Transcriptional regulators.
  
  
 0.713
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.