STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK64560.1COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (408 aa)    
Predicted Functional Partners:
AFK61510.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
 0.992
AFK64559.1
Short chain dehydrogenase/reductase family oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 0.985
AFK64557.1
COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 
0.982
AFK64558.1
Thioester dehydrase family protein; COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase.
 
   
 0.947
AFK64545.1
AMP-binding protein; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
 
 0.943
AFK61585.1
COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
 
 0.939
AFK64542.1
COG0236 Acyl carrier protein.
 
 
 0.921
AFK62265.1
3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 
0.915
AFK64555.1
Tryptophan halogenase; COG0644 Dehydrogenases (flavoproteins).
 
   
 0.908
AFK61469.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
    
  0.901
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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