STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF65001.1PTS system, nitrogen regulatory IIA component. (157 aa)    
Predicted Functional Partners:
SDG47244.1
Phosphocarrier protein.
 
 
 0.914
SDG47281.1
PTS system, mannose-specific IIA component.
 
 
 0.890
SDF65043.1
Ribosomal subunit interface protein.
  
  
 0.887
SDF60120.1
Phosphotransferase system, enzyme I, PtsP.
  
   
 0.795
SDF65087.1
RNA polymerase sigma-54 factor.
 
  
 0.762
SDG73441.1
Acyl transferase domain-containing protein.
  
 0.697
SDG31553.1
Fructose-bisphosphate aldolase.
  
 
 0.674
SDH06059.1
ROK family protein (putative glucokinase).
   
 
 0.625
SDF64963.1
Fumarate hydratase, class I.
       0.615
SDG92024.1
DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family.
 
  
 0.574
Your Current Organism:
Bosea robiniae
NCBI taxonomy Id: 1036780
Other names: B. robiniae, Bosea robiniae De Meyer and Willems 2012, Bosea sp. LMG 26381, Bosea sp. R-46070, CCUG 61249, DSM 26672, LMG 26381, LMG:26381, strain R-46070
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.