STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH76089.1DNA-nicking endonuclease, Smr domain. (187 aa)    
Predicted Functional Partners:
SDG70360.1
Small subunit ribosomal protein S1.
  
 
   0.919
SDF23524.1
LSU ribosomal protein L33P.
  
 
   0.918
SDG24873.1
Large subunit ribosomal protein L28.
    
   0.912
SDH41007.1
Small subunit ribosomal protein S14.
    
   0.912
SDH41708.1
SSU ribosomal protein S10P.
   
 
 0.912
SDH41564.1
Large subunit ribosomal protein L23.
    
   0.911
SDH41865.1
Small subunit ribosomal protein S7.
   
   0.911
SDH41911.1
SSU ribosomal protein S12P.
   
   0.911
SDG51627.1
Small subunit ribosomal protein S20.
   
   0.908
SDF29623.1
Small subunit ribosomal protein S9.
    
   0.907
Your Current Organism:
Bosea robiniae
NCBI taxonomy Id: 1036780
Other names: B. robiniae, Bosea robiniae De Meyer and Willems 2012, Bosea sp. LMG 26381, Bosea sp. R-46070, CCUG 61249, DSM 26672, LMG 26381, LMG:26381, strain R-46070
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.