Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0438 | all1731 | gene:10492447 | gene:10493749 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:all1731; hypothetical protein. | 0.635 |
all0438 | all2470 | gene:10492447 | gene:10494501 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:all2470; hypothetical protein. | 0.561 |
all0438 | all3220 | gene:10492447 | gene:10495258 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:all3220; hypothetical protein. | 0.521 |
all0438 | all5016 | gene:10492447 | gene:10497074 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:all5016; hypothetical protein. | 0.485 |
all0438 | alr0547 | gene:10492447 | gene:10492558 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:alr0547; probable protein phosphatase. | 0.605 |
all0438 | alr2418 | gene:10492447 | gene:10494448 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.497 |
all0438 | alr3494 | gene:10492447 | gene:10495533 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:alr3494; hypothetical protein. | 0.471 |
all0438 | alr4516 | gene:10492447 | gene:10496565 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:alr4516; probable protein phosphatase. | 0.628 |
all0438 | alr5360 | gene:10492447 | gene:10497422 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | ORF_ID:alr5360; hypothetical protein. | 0.456 |
all0438 | cyaD | gene:10492447 | gene:10492754 | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | Adenylate cyclase; ORF_ID:all0743; cyaD gene product. | 0.528 |
all1731 | all0438 | gene:10493749 | gene:10492447 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.635 |
all2470 | all0438 | gene:10494501 | gene:10492447 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.561 |
all3220 | all0438 | gene:10495258 | gene:10492447 | ORF_ID:all3220; hypothetical protein. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.521 |
all5016 | all0438 | gene:10497074 | gene:10492447 | ORF_ID:all5016; hypothetical protein. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.485 |
alr0547 | all0438 | gene:10492558 | gene:10492447 | ORF_ID:alr0547; probable protein phosphatase. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.605 |
alr2418 | all0438 | gene:10494448 | gene:10492447 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.497 |
alr3494 | all0438 | gene:10495533 | gene:10492447 | ORF_ID:alr3494; hypothetical protein. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.471 |
alr4516 | all0438 | gene:10496565 | gene:10492447 | ORF_ID:alr4516; probable protein phosphatase. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.628 |
alr5360 | all0438 | gene:10497422 | gene:10492447 | ORF_ID:alr5360; hypothetical protein. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.456 |
cyaD | all0438 | gene:10492754 | gene:10492447 | Adenylate cyclase; ORF_ID:all0743; cyaD gene product. | Serine/threonine kinase with WD-40 repeat; ORF_ID:all0438. | 0.528 |