Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1640 | all3767 | gene:10493657 | gene:10495809 | Two-component response regulator; ORF_ID:all1640. | Two-component sensor histidine kinase; ORF_ID:all3767. | 0.640 |
all1640 | all4225 | gene:10493657 | gene:10496274 | Two-component response regulator; ORF_ID:all1640. | ORF_ID:all4225; hypothetical protein. | 0.743 |
all1640 | all4897 | gene:10493657 | gene:10496951 | Two-component response regulator; ORF_ID:all1640. | ORF_ID:all4897; hypothetical protein. | 0.668 |
all1640 | alr5251 | gene:10493657 | gene:10497310 | Two-component response regulator; ORF_ID:all1640. | Two-component response regulator; ORF_ID:alr5251. | 0.862 |
all1847 | all1848 | gene:10493866 | gene:10493867 | ORF_ID:all1847; similar to protein-glutamate methylesterase. | ORF_ID:all1848; similar to methyltransferase. | 0.998 |
all1847 | all3767 | gene:10493866 | gene:10495809 | ORF_ID:all1847; similar to protein-glutamate methylesterase. | Two-component sensor histidine kinase; ORF_ID:all3767. | 0.862 |
all1847 | all4225 | gene:10493866 | gene:10496274 | ORF_ID:all1847; similar to protein-glutamate methylesterase. | ORF_ID:all4225; hypothetical protein. | 0.720 |
all1847 | all4897 | gene:10493866 | gene:10496951 | ORF_ID:all1847; similar to protein-glutamate methylesterase. | ORF_ID:all4897; hypothetical protein. | 0.682 |
all1847 | alr3599 | gene:10493866 | gene:10495640 | ORF_ID:all1847; similar to protein-glutamate methylesterase. | Two-component response regulator; ORF_ID:alr3599. | 0.410 |
all1848 | all1847 | gene:10493867 | gene:10493866 | ORF_ID:all1848; similar to methyltransferase. | ORF_ID:all1847; similar to protein-glutamate methylesterase. | 0.998 |
all1848 | all3767 | gene:10493867 | gene:10495809 | ORF_ID:all1848; similar to methyltransferase. | Two-component sensor histidine kinase; ORF_ID:all3767. | 0.923 |
all1848 | all4225 | gene:10493867 | gene:10496274 | ORF_ID:all1848; similar to methyltransferase. | ORF_ID:all4225; hypothetical protein. | 0.776 |
all1848 | all4897 | gene:10493867 | gene:10496951 | ORF_ID:all1848; similar to methyltransferase. | ORF_ID:all4897; hypothetical protein. | 0.834 |
all3767 | all1640 | gene:10495809 | gene:10493657 | Two-component sensor histidine kinase; ORF_ID:all3767. | Two-component response regulator; ORF_ID:all1640. | 0.640 |
all3767 | all1847 | gene:10495809 | gene:10493866 | Two-component sensor histidine kinase; ORF_ID:all3767. | ORF_ID:all1847; similar to protein-glutamate methylesterase. | 0.862 |
all3767 | all1848 | gene:10495809 | gene:10493867 | Two-component sensor histidine kinase; ORF_ID:all3767. | ORF_ID:all1848; similar to methyltransferase. | 0.923 |
all3767 | all4225 | gene:10495809 | gene:10496274 | Two-component sensor histidine kinase; ORF_ID:all3767. | ORF_ID:all4225; hypothetical protein. | 0.681 |
all3767 | all4897 | gene:10495809 | gene:10496951 | Two-component sensor histidine kinase; ORF_ID:all3767. | ORF_ID:all4897; hypothetical protein. | 0.664 |
all3767 | alr2240 | gene:10495809 | gene:10494269 | Two-component sensor histidine kinase; ORF_ID:all3767. | Two-component response regulator; ORF_ID:alr2240. | 0.595 |
all3767 | alr3599 | gene:10495809 | gene:10495640 | Two-component sensor histidine kinase; ORF_ID:all3767. | Two-component response regulator; ORF_ID:alr3599. | 0.456 |
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