Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1731 | all1958 | gene:10493749 | gene:10493977 | ORF_ID:all1731; hypothetical protein. | ORF_ID:all1958; unknown protein. | 0.573 |
all1731 | all3773 | gene:10493749 | gene:10495815 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:all3773. | 0.606 |
all1731 | alr0548 | gene:10493749 | gene:10492559 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr0548. | 0.828 |
all1731 | alr3606 | gene:10493749 | gene:10495647 | ORF_ID:all1731; hypothetical protein. | Dihydrolipoamide S-acetyltransferase; ORF_ID:alr3606. | 0.457 |
all1731 | alr4954 | gene:10493749 | gene:10497009 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4954. | 0.821 |
all1958 | all1731 | gene:10493977 | gene:10493749 | ORF_ID:all1958; unknown protein. | ORF_ID:all1731; hypothetical protein. | 0.573 |
all1958 | all2470 | gene:10493977 | gene:10494501 | ORF_ID:all1958; unknown protein. | ORF_ID:all2470; hypothetical protein. | 0.573 |
all1958 | alr0547 | gene:10493977 | gene:10492558 | ORF_ID:all1958; unknown protein. | ORF_ID:alr0547; probable protein phosphatase. | 0.573 |
all1958 | alr0548 | gene:10493977 | gene:10492559 | ORF_ID:all1958; unknown protein. | Serine/threonine kinase; ORF_ID:alr0548. | 0.798 |
all1958 | alr4516 | gene:10493977 | gene:10496565 | ORF_ID:all1958; unknown protein. | ORF_ID:alr4516; probable protein phosphatase. | 0.573 |
all1958 | alr4954 | gene:10493977 | gene:10497009 | ORF_ID:all1958; unknown protein. | Serine/threonine kinase; ORF_ID:alr4954. | 0.798 |
all1958 | cyaD | gene:10493977 | gene:10492754 | ORF_ID:all1958; unknown protein. | Adenylate cyclase; ORF_ID:all0743; cyaD gene product. | 0.513 |
all2470 | all1958 | gene:10494501 | gene:10493977 | ORF_ID:all2470; hypothetical protein. | ORF_ID:all1958; unknown protein. | 0.573 |
all2470 | all3773 | gene:10494501 | gene:10495815 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:all3773. | 0.579 |
all2470 | alr0548 | gene:10494501 | gene:10492559 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr0548. | 0.820 |
all2470 | alr3606 | gene:10494501 | gene:10495647 | ORF_ID:all2470; hypothetical protein. | Dihydrolipoamide S-acetyltransferase; ORF_ID:alr3606. | 0.457 |
all2470 | alr4954 | gene:10494501 | gene:10497009 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4954. | 0.815 |
all3773 | all1731 | gene:10495815 | gene:10493749 | Serine/threonine kinase; ORF_ID:all3773. | ORF_ID:all1731; hypothetical protein. | 0.606 |
all3773 | all2470 | gene:10495815 | gene:10494501 | Serine/threonine kinase; ORF_ID:all3773. | ORF_ID:all2470; hypothetical protein. | 0.579 |
all3773 | alr0547 | gene:10495815 | gene:10492558 | Serine/threonine kinase; ORF_ID:all3773. | ORF_ID:alr0547; probable protein phosphatase. | 0.509 |
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