node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
alr1254 | alr3638 | gene:10493268 | gene:10495680 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | 0.985 |
alr1254 | alr4175 | gene:10493268 | gene:10496224 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.477 |
alr1254 | dnaN | gene:10493268 | gene:10494034 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.996 |
alr1254 | mutL | gene:10493268 | gene:10495091 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (By similarity). | 0.973 |
alr1254 | radA | gene:10493268 | gene:10495865 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA repair protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.474 |
alr1254 | recA | gene:10493268 | gene:10495310 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.995 |
alr1254 | recJ | gene:10493268 | gene:10494013 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | single-strand-DNA-specific exonuclease; ORF_ID:all1989; recJ gene product. | 0.532 |
alr1254 | recJ-2 | gene:10493268 | gene:10497186 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | single-stranded-DNA-specific exonuclease; ORF_ID:alr5127; recJ gene product. | 0.547 |
alr1254 | recQ | gene:10493268 | gene:10496896 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | ATP-dependent DNA helicase; ORF_ID:alr4842; recQ gene product. | 0.943 |
alr1254 | ruvB | gene:10493268 | gene:10494929 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.723 |
alr3638 | alr1254 | gene:10495680 | gene:10493268 | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.985 |
alr3638 | dnaN | gene:10495680 | gene:10494034 | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.987 |
alr3638 | mutL | gene:10495680 | gene:10495091 | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (By similarity). | 0.999 |
alr3638 | recA | gene:10495680 | gene:10495310 | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.604 |
alr3638 | recJ | gene:10495680 | gene:10494013 | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | single-strand-DNA-specific exonuclease; ORF_ID:all1989; recJ gene product. | 0.446 |
alr3638 | recJ-2 | gene:10495680 | gene:10497186 | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | single-stranded-DNA-specific exonuclease; ORF_ID:alr5127; recJ gene product. | 0.480 |
alr3638 | recQ | gene:10495680 | gene:10496896 | DNA mismatch repair protein; ORF_ID:alr3638; Belongs to the DNA mismatch repair MutS family. | ATP-dependent DNA helicase; ORF_ID:alr4842; recQ gene product. | 0.571 |
alr4175 | alr1254 | gene:10496224 | gene:10493268 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.477 |
alr4175 | dnaN | gene:10496224 | gene:10494034 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.511 |
alr4175 | mutL | gene:10496224 | gene:10495091 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (By similarity). | 0.829 |