STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr3668Urease beta subunit; ORF_ID:alr3668; Belongs to the urease beta subunit family. (108 aa)    
Predicted Functional Partners:
alr3667
Urease gamma subunit; ORF_ID:alr3667; Belongs to the urease gamma subunit family.
 0.999
alr3670
Urease alpha subunit; ORF_ID:alr3670; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 0.999
alr3666
Urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.998
alr0734
Urease accessory protein F; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.994
alr0733
Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.992
alr0735
Urease accessory protein G; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.992
hupB
Hydrogenase expression/formation protein; ORF_ID:alr0700; hupB gene product.
  
  
 0.713
hupE-2
Hydrogenase accessory protein; ORF_ID:alr4717; hupE gene product.
  
  
 0.461
asl3665
ORF_ID:asl3665; unknown protein.
       0.460
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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