STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apcEPhycobilisome core-membrane linker protein; This protein is postulated to act both as terminal energy acceptor (by its phycobilin-like domains) and as a linker polypeptide (by its repeats and arms) that stabilizes the phycobilisome core architecture. Has intrinsic bilin lyase activity (By similarity). (1132 aa)    
Predicted Functional Partners:
apcC
Phycobilisome core linker protein Lc7.8; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 
 0.999
apcF
Phycobilisome core component; A variant beta-allophycocyanin (AP) which forms a complex with ApcE, a phycobilisome terminal emitter that influences energy transfer to photosystem II; Belongs to the phycobiliprotein family.
  
 
 
 0.999
apcD
Allophycocyanin B alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers.
  
 
 
 0.999
apcB
Allophycocyanin beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 to 653 nanometers.
 
 
 
0.994
cpcA
Phycocyanin alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
 
 
 0.993
apcA
Allophycocyanin alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 to 653 nanometers.
 
 
 
0.986
cpcG4
Phycobilisome rod-core linker protein; Rod-core linker protein required for attachment of phycocyanin to allophycocyanin in cores of phycobilisomes.
  
 
 
0.967
cpcG2
Phycobilisome rod-core linker protein; Rod-core linker protein required for attachment of phycocyanin to allophycocyanin in cores of phycobilisomes.
  
 
 
0.958
cpcB
Phycocyanin beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
 
 
0.957
cpcC
Phycocyanin-associated rod linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
0.948
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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