STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr0029WD-40 repeat protein; ORF_ID:alr0029. (1227 aa)    
Predicted Functional Partners:
all0665
ORF_ID:all0665; unknown protein.
 
     0.549
all2787
ORF_ID:all2787; probable kinesin light chain.
 
 0.542
alr2679
Polyketide synthase; ORF_ID:alr2679.
  
 
 0.534
alr2418
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.527
all3838
ORF_ID:all3838; similar to kinesin light chain.
  
 
 0.527
alr0354
Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0354.
  
 
 0.526
alr0710
Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0710.
  
 
 0.526
all3691
Serine/threonine kinase with two-component sensor domain; ORF_ID:all3691.
  
 
 0.526
all3780
ORF_ID:all3780; similar to kinesin light chain.
 
 
 0.524
all3220
ORF_ID:all3220; hypothetical protein.
    
 0.521
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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