STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all0065ORF_ID:all0065; hypothetical protein. (116 aa)    
Predicted Functional Partners:
alr4660
ORF_ID:alr4660; hypothetical protein.
  
     0.775
alr3707
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Upon overexpression in E.coli with PCB:ferredoxin oxidoreductase, CpeS and either CpcB or PecB permits synthesis of phycocyanin-coupled CpcB or PecB; Belongs to the HY2 family.
  
     0.771
asr2387
ORF_ID:asr2387; hypothetical protein.
  
     0.769
alr4308
ORF_ID:alr4308; hypothetical protein.
  
     0.767
all4101
ORF_ID:all4101; hypothetical protein; Belongs to the ycf91 family.
  
     0.765
asl5079
ORF_ID:asl5079; hypothetical protein.
  
     0.762
asl5170
ORF_ID:asl5170; hypothetical protein.
  
     0.760
all1023
ORF_ID:all1023; hypothetical protein.
  
     0.759
all5250
ORF_ID:all5250; hypothetical protein.
  
     0.759
asr0773
ORF_ID:asr0773; hypothetical protein.
  
     0.758
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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