Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0156 | all0157 | gene:10492161 | gene:10492162 | ORF_ID:all0156; hypothetical protein. | ORF_ID:all0157; hypothetical protein. | 0.528 |
all0156 | all0158 | gene:10492161 | gene:10492163 | ORF_ID:all0156; hypothetical protein. | ORF_ID:all0158; hypothetical protein. | 0.528 |
all0156 | all1958 | gene:10492161 | gene:10493977 | ORF_ID:all0156; hypothetical protein. | ORF_ID:all1958; unknown protein. | 0.477 |
all0156 | alr3606 | gene:10492161 | gene:10495647 | ORF_ID:all0156; hypothetical protein. | Dihydrolipoamide S-acetyltransferase; ORF_ID:alr3606. | 0.537 |
all0156 | gltS | gene:10492161 | gene:10496393 | ORF_ID:all0156; hypothetical protein. | Ferredoxin-glutamate synthase; ORF_ID:alr4344. | 0.499 |
all0157 | all0156 | gene:10492162 | gene:10492161 | ORF_ID:all0157; hypothetical protein. | ORF_ID:all0156; hypothetical protein. | 0.528 |
all0157 | all0158 | gene:10492162 | gene:10492163 | ORF_ID:all0157; hypothetical protein. | ORF_ID:all0158; hypothetical protein. | 0.783 |
all0158 | all0156 | gene:10492163 | gene:10492161 | ORF_ID:all0158; hypothetical protein. | ORF_ID:all0156; hypothetical protein. | 0.528 |
all0158 | all0157 | gene:10492163 | gene:10492162 | ORF_ID:all0158; hypothetical protein. | ORF_ID:all0157; hypothetical protein. | 0.783 |
all1958 | all0156 | gene:10493977 | gene:10492161 | ORF_ID:all1958; unknown protein. | ORF_ID:all0156; hypothetical protein. | 0.477 |
alr3606 | all0156 | gene:10495647 | gene:10492161 | Dihydrolipoamide S-acetyltransferase; ORF_ID:alr3606. | ORF_ID:all0156; hypothetical protein. | 0.537 |
alr3606 | gltS | gene:10495647 | gene:10496393 | Dihydrolipoamide S-acetyltransferase; ORF_ID:alr3606. | Ferredoxin-glutamate synthase; ORF_ID:alr4344. | 0.485 |
gltS | all0156 | gene:10496393 | gene:10492161 | Ferredoxin-glutamate synthase; ORF_ID:alr4344. | ORF_ID:all0156; hypothetical protein. | 0.499 |
gltS | alr3606 | gene:10496393 | gene:10495647 | Ferredoxin-glutamate synthase; ORF_ID:alr4344. | Dihydrolipoamide S-acetyltransferase; ORF_ID:alr3606. | 0.485 |