STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all0170Glycolate oxidase; ORF_ID:all0170. (365 aa)    
Predicted Functional Partners:
all2096
Oxidase; ORF_ID:all2096.
      
 0.600
all0324
ORF_ID:all0324; hypothetical protein.
 
 0.541
glcE
Glycolate oxidase subunit; ORF_ID:all0624; glcE gene product.
 
 0.541
all0172
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.504
alr1004
Alanine--glyoxylate aminotransferase; ORF_ID:alr1004.
  
 0.478
alr2678
ORF_ID:alr2678; probable acyl-CoA synthase.
  
 
 0.474
alr0540
1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family.
  
  
 0.472
all4443
ORF_ID:all4443; hypothetical protein.
  
 0.467
glcD
Glycolate oxidase subunit; ORF_ID:alr5269; glcD gene product.
 
 0.467
all2846
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.456
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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