STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asl0272ORF_ID:asl0272; hypothetical protein. (51 aa)    
Predicted Functional Partners:
all4666
ORF_ID:all4666; hypothetical protein.
  
     0.755
all0271
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.751
alr0871
ORF_ID:alr0871; hypothetical protein.
  
     0.670
asr0062
ORF_ID:asr0062; hypothetical protein.
  
     0.649
all2971
ORF_ID:all2971; hypothetical protein.
  
     0.636
alr4158
ORF_ID:alr4158; hypothetical protein.
  
     0.631
alr4075
ORF_ID:alr4075; hypothetical protein.
  
     0.625
all1023
ORF_ID:all1023; hypothetical protein.
  
     0.609
asr4076
ORF_ID:asr4076; hypothetical protein.
  
     0.604
alr1410
ORF_ID:alr1410; hypothetical protein.
  
     0.602
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.