STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypFHydrogenase maturation protein; ORF_ID:alr0694; hypF gene product. (785 aa)    
Predicted Functional Partners:
hupE
Hydrogenase expression/formation protein; ORF_ID:alr0698; hupE gene product.
 
 
 0.993
hupA
Hydrogenase expression/formation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.989
hupC
Hydrogenase expression/formation protein; ORF_ID:asr0695; hypC gene product.
 
 
 0.984
hupB
Hydrogenase expression/formation protein; ORF_ID:alr0700; hupB gene product.
 
   
 0.950
hupD
Hydrogenase expression/formation protein; ORF_ID:alr0696; hypD gene product.
 
  
 0.938
hupL
[NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product.
 
 
 
 0.792
hoxH
Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product.
 
   
 0.774
asr0697
Tautomerase; ORF_ID:asr0697; probable 4-oxalocrotonate tautomerase.
  
 
 0.759
all0688
[NiFe] uptake hydrogenase small subunit; ORF_ID:all0688; hupS gene product.
 
 
 
 0.737
all0245
ORF_ID:all0245; hypothetical protein.
      
 0.723
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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