Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0703 | alr0691 | gene:10492713 | gene:10492701 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | ORF_ID:alr0691; hypothetical protein. | 0.657 |
all0703 | alr0692 | gene:10492713 | gene:10492702 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | ORF_ID:alr0692; similar to NifU protein. | 0.658 |
all0703 | alr0693 | gene:10492713 | gene:10492703 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | ORF_ID:alr0693; unknown protein. | 0.611 |
all0703 | alr0702 | gene:10492713 | gene:10492712 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | Serine proteinase; ORF_ID:alr0702. | 0.932 |
all0703 | alr1571 | gene:10492713 | gene:10493587 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | ORF_ID:alr1571; unknown protein. | 0.722 |
all0703 | asr0689 | gene:10492713 | gene:10492699 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | ORF_ID:asr0689; unknown protein. | 0.603 |
all0703 | asr0690 | gene:10492713 | gene:10492700 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | ORF_ID:asr0690; unknown protein. | 0.657 |
all0703 | asr0697 | gene:10492713 | gene:10492707 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | Tautomerase; ORF_ID:asr0697; probable 4-oxalocrotonate tautomerase. | 0.503 |
all0703 | asr0701 | gene:10492713 | gene:10492711 | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | ORF_ID:asr0701; unknown protein. | 0.722 |
alr0691 | all0703 | gene:10492701 | gene:10492713 | ORF_ID:alr0691; hypothetical protein. | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | 0.657 |
alr0691 | alr0692 | gene:10492701 | gene:10492702 | ORF_ID:alr0691; hypothetical protein. | ORF_ID:alr0692; similar to NifU protein. | 0.988 |
alr0691 | alr0693 | gene:10492701 | gene:10492703 | ORF_ID:alr0691; hypothetical protein. | ORF_ID:alr0693; unknown protein. | 0.990 |
alr0691 | alr0702 | gene:10492701 | gene:10492712 | ORF_ID:alr0691; hypothetical protein. | Serine proteinase; ORF_ID:alr0702. | 0.560 |
alr0691 | alr1571 | gene:10492701 | gene:10493587 | ORF_ID:alr0691; hypothetical protein. | ORF_ID:alr1571; unknown protein. | 0.540 |
alr0691 | asr0689 | gene:10492701 | gene:10492699 | ORF_ID:alr0691; hypothetical protein. | ORF_ID:asr0689; unknown protein. | 0.952 |
alr0691 | asr0690 | gene:10492701 | gene:10492700 | ORF_ID:alr0691; hypothetical protein. | ORF_ID:asr0690; unknown protein. | 0.952 |
alr0691 | asr0697 | gene:10492701 | gene:10492707 | ORF_ID:alr0691; hypothetical protein. | Tautomerase; ORF_ID:asr0697; probable 4-oxalocrotonate tautomerase. | 0.781 |
alr0691 | asr0701 | gene:10492701 | gene:10492711 | ORF_ID:alr0691; hypothetical protein. | ORF_ID:asr0701; unknown protein. | 0.596 |
alr0691 | hupA | gene:10492701 | gene:10492709 | ORF_ID:alr0691; hypothetical protein. | Hydrogenase expression/formation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.448 |
alr0692 | all0703 | gene:10492702 | gene:10492713 | ORF_ID:alr0692; similar to NifU protein. | Probable membrane transporter protein; ORF_ID:all0703; hypothetical protein. | 0.658 |
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