STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxHHydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. (483 aa)    
Predicted Functional Partners:
hoxY
Hydrogenase small subunit; ORF_ID:alr0764; hoxY gene product.
 
 
 0.999
hoxF
Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product.
 
 
 
 0.996
hoxU
Hydrogenase chain U; ORF_ID:alr0762; hoxU gene product.
 
   
 0.977
all0770
ORF_ID:all0770; hypothetical protein.
 
  
 0.847
hupL
[NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product.
 
  
0.776
hypF
Hydrogenase maturation protein; ORF_ID:alr0694; hypF gene product.
 
   
 0.774
hupE
Hydrogenase expression/formation protein; ORF_ID:alr0698; hupE gene product.
 
   
 0.720
hupD
Hydrogenase expression/formation protein; ORF_ID:alr0696; hypD gene product.
 
   
 0.713
asr3935
DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family.
      
 0.708
alr0765
ORF_ID:alr0765; hypothetical protein.
     
 0.681
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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