STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all0775Squalene-hopene-cyclase; ORF_ID:all0775. (637 aa)    
Predicted Functional Partners:
alr1805
ORF_ID:alr1805; hypothetical protein.
 
 
 0.980
alr4269
ORF_ID:alr4269; hypothetical protein.
   
 0.931
alr0776
ORF_ID:alr0776; hypothetical protein.
 
     0.895
alr4268
ORF_ID:alr4268; putative dihydroflavonol 4-reductase.
 
 
 0.853
alr0213
Geranylgeranyl diphosphate synthase; ORF_ID:alr0213; Belongs to the FPP/GGPP synthase family.
  
  
 0.810
alr1909
ORF_ID:alr1909; hypothetical protein.
   
 
 0.773
all4265
ORF_ID:all4265; hypothetical protein.
 
   
 0.771
alr5283
Aldehyde decarbonylase; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
     
 0.771
all5295
ORF_ID:all5295; putative dihydrokaempferol 4-reductase.
 
 
 0.760
all2658
ORF_ID:all2658; hypothetical protein.
   
 
 0.725
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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