STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all0830ABC transporter permease protein; ORF_ID:all0830. (294 aa)    
Predicted Functional Partners:
all0832
ATP-binding protein of ABC transporter; ORF_ID:all0832.
 0.995
all0833
Periplasmic solute binding protein for ABC transport system; ORF_ID:all0833; Belongs to the bacterial solute-binding protein 9 family.
 
 0.985
all3575
ATP-binding protein of ABC transporter; ORF_ID:all3575.
 
 0.976
alr3576
Adhesin precursor; ORF_ID:alr3576; Belongs to the bacterial solute-binding protein 9 family.
  
 0.952
all1748
ORF_ID:all1748; putative lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.940
all3574
Permease protein of ABC transporter; ORF_ID:all3574.
  
  
 
0.518
alr3187
Glutamine-binding periplasmic protein of glutamine ABC transporter; ORF_ID:alr3187.
  
 
 0.489
alr0831
ORF_ID:alr0831; transcriptional regulator, smtB homolog.
     
 0.482
alr4068
ATP-binding protein of ABC transporter; ORF_ID:alr4068.
     
 0.445
alr2373
Transport permease protein; ORF_ID:alr2373; hypothetical protein.
 
  
  0.442
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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