STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr0942ORF_ID:alr0942; hypothetical protein. (300 aa)    
Predicted Functional Partners:
alr0943
ORF_ID:alr0943; hypothetical protein.
 
     0.805
all4118
ORF_ID:all4118; hypothetical protein.
  
     0.775
alr2543
ORF_ID:alr2543; hypothetical protein.
  
     0.774
asr2387
ORF_ID:asr2387; hypothetical protein.
  
     0.756
alr1129
ORF_ID:alr1129; hypothetical protein.
  
     0.745
alr0944
ORF_ID:alr0944; hypothetical protein.
 
     0.727
alr3707
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Upon overexpression in E.coli with PCB:ferredoxin oxidoreductase, CpeS and either CpcB or PecB permits synthesis of phycocyanin-coupled CpcB or PecB; Belongs to the HY2 family.
  
     0.724
alr1133
ORF_ID:alr1133; hypothetical protein.
  
     0.719
alr2431
ORF_ID:alr2431; hypothetical protein.
  
     0.709
alr2980
ORF_ID:alr2980; hypothetical protein.
  
     0.693
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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