Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1062 | all1541 | gene:10493076 | gene:10493554 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity). | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | 0.634 |
all1062 | alr1013 | gene:10493076 | gene:10493027 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity). | ORF_ID:alr1013; hypothetical protein. | 0.641 |
all1062 | alr3901 | gene:10493076 | gene:10495943 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity). | ORF_ID:alr3901; hypothetical protein. | 0.993 |
all1541 | all1062 | gene:10493554 | gene:10493076 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity). | 0.634 |
all1541 | alr1013 | gene:10493554 | gene:10493027 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | ORF_ID:alr1013; hypothetical protein. | 0.771 |
all1541 | alr1675 | gene:10493554 | gene:10493692 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | protein-methionine-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity). | 0.634 |
all1541 | alr3901 | gene:10493554 | gene:10495943 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | ORF_ID:alr3901; hypothetical protein. | 0.456 |
all1541 | alr3937 | gene:10493554 | gene:10495979 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | Mercuric reductase; ORF_ID:alr3937. | 0.452 |
all1541 | alr4404 | gene:10493554 | gene:10496453 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | AhpC/TSA family protein; ORF_ID:alr4404. | 0.966 |
all1541 | alr4641 | gene:10493554 | gene:10496692 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | Peroxiredoxin; ORF_ID:alr4641. | 0.985 |
all1541 | alr4745 | gene:10493554 | gene:10496798 | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | Dihydrolipoamide dehydrogenase; ORF_ID:alr4745. | 0.452 |
alr1013 | all1062 | gene:10493027 | gene:10493076 | ORF_ID:alr1013; hypothetical protein. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity). | 0.641 |
alr1013 | all1541 | gene:10493027 | gene:10493554 | ORF_ID:alr1013; hypothetical protein. | Peroxiredoxin 2 family protein/glutaredoxin; ORF_ID:all1541. | 0.771 |
alr1013 | alr1675 | gene:10493027 | gene:10493692 | ORF_ID:alr1013; hypothetical protein. | protein-methionine-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity). | 0.641 |
alr1013 | alr2678 | gene:10493027 | gene:10494709 | ORF_ID:alr1013; hypothetical protein. | ORF_ID:alr2678; probable acyl-CoA synthase. | 0.536 |
alr1013 | alr3901 | gene:10493027 | gene:10495943 | ORF_ID:alr1013; hypothetical protein. | ORF_ID:alr3901; hypothetical protein. | 0.527 |
alr1013 | alr3937 | gene:10493027 | gene:10495979 | ORF_ID:alr1013; hypothetical protein. | Mercuric reductase; ORF_ID:alr3937. | 0.523 |
alr1013 | alr4404 | gene:10493027 | gene:10496453 | ORF_ID:alr1013; hypothetical protein. | AhpC/TSA family protein; ORF_ID:alr4404. | 0.678 |
alr1013 | alr4641 | gene:10493027 | gene:10496692 | ORF_ID:alr1013; hypothetical protein. | Peroxiredoxin; ORF_ID:alr4641. | 0.678 |
alr1013 | alr4745 | gene:10493027 | gene:10496798 | ORF_ID:alr1013; hypothetical protein. | Dihydrolipoamide dehydrogenase; ORF_ID:alr4745. | 0.523 |
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