STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all1027Periplasmic sugar-binding protein of ABC transporter; ORF_ID:all1027. (432 aa)    
Predicted Functional Partners:
all4824
Permease protein of sugar ABC transporter; ORF_ID:all4824.
 
 0.983
alr0738
Permease protein of sugar ABC transporter; ORF_ID:alr0738.
 0.982
all0261
Sugar transport system permease protein; ORF_ID:all0261.
 
 
 0.911
all5282
ABC transporter sugar permease; ORF_ID:all5282.
 
 
 0.900
alr2532
Sugar ABC transport system, permease protein; ORF_ID:alr2532.
 
 0.898
all4873
Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
      
 0.897
alr0789
ABC transporter sugar permease; ORF_ID:alr0789.
 
 0.889
alr4781
ATP-binding protein of sugar ABC transporter; ORF_ID:alr4781; Belongs to the ABC transporter superfamily.
 
 
 0.874
all1823
Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.
 
 
 0.805
alr1356
ORF_ID:alr1356; hypothetical protein.
  
     0.610
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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