Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0714 | all0781 | gene:10492724 | gene:10492792 | ORF_ID:all0714; hypothetical protein. | ORF_ID:all0781; hypothetical protein. | 0.766 |
all0714 | all1075 | gene:10492724 | gene:10493089 | ORF_ID:all0714; hypothetical protein. | parA family protein; ORF_ID:all1075. | 0.602 |
all0714 | alr0821 | gene:10492724 | gene:10492832 | ORF_ID:all0714; hypothetical protein. | ORF_ID:alr0821; hypothetical protein. | 0.585 |
all0714 | alr1278 | gene:10492724 | gene:10493292 | ORF_ID:all0714; hypothetical protein. | ORF_ID:alr1278; hypothetical protein. | 0.757 |
all0714 | alr2927 | gene:10492724 | gene:10494963 | ORF_ID:all0714; hypothetical protein. | ORF_ID:alr2927; hypothetical protein. | 0.684 |
all0714 | alr3330 | gene:10492724 | gene:10495368 | ORF_ID:all0714; hypothetical protein. | ORF_ID:alr3330; hypothetical protein. | 0.593 |
all0714 | alr3798 | gene:10492724 | gene:10495840 | ORF_ID:all0714; hypothetical protein. | Glutathione S-transferase; ORF_ID:alr3798. | 0.717 |
all0781 | all0714 | gene:10492792 | gene:10492724 | ORF_ID:all0781; hypothetical protein. | ORF_ID:all0714; hypothetical protein. | 0.766 |
all0781 | all1075 | gene:10492792 | gene:10493089 | ORF_ID:all0781; hypothetical protein. | parA family protein; ORF_ID:all1075. | 0.770 |
all0781 | alr0821 | gene:10492792 | gene:10492832 | ORF_ID:all0781; hypothetical protein. | ORF_ID:alr0821; hypothetical protein. | 0.756 |
all0781 | alr1278 | gene:10492792 | gene:10493292 | ORF_ID:all0781; hypothetical protein. | ORF_ID:alr1278; hypothetical protein. | 0.732 |
all0781 | alr2927 | gene:10492792 | gene:10494963 | ORF_ID:all0781; hypothetical protein. | ORF_ID:alr2927; hypothetical protein. | 0.779 |
all0781 | alr3330 | gene:10492792 | gene:10495368 | ORF_ID:all0781; hypothetical protein. | ORF_ID:alr3330; hypothetical protein. | 0.752 |
all0781 | alr3798 | gene:10492792 | gene:10495840 | ORF_ID:all0781; hypothetical protein. | Glutathione S-transferase; ORF_ID:alr3798. | 0.784 |
all1075 | all0714 | gene:10493089 | gene:10492724 | parA family protein; ORF_ID:all1075. | ORF_ID:all0714; hypothetical protein. | 0.602 |
all1075 | all0781 | gene:10493089 | gene:10492792 | parA family protein; ORF_ID:all1075. | ORF_ID:all0781; hypothetical protein. | 0.770 |
all1075 | alr0821 | gene:10493089 | gene:10492832 | parA family protein; ORF_ID:all1075. | ORF_ID:alr0821; hypothetical protein. | 0.638 |
all1075 | alr1114 | gene:10493089 | gene:10493128 | parA family protein; ORF_ID:all1075. | ORF_ID:alr1114; unknown protein. | 0.675 |
all1075 | alr1278 | gene:10493089 | gene:10493292 | parA family protein; ORF_ID:all1075. | ORF_ID:alr1278; hypothetical protein. | 0.643 |
all1075 | alr2927 | gene:10493089 | gene:10494963 | parA family protein; ORF_ID:all1075. | ORF_ID:alr2927; hypothetical protein. | 0.751 |
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