STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all1339ORF_ID:all1339; unknown protein. (285 aa)    
Predicted Functional Partners:
all1338
ORF_ID:all1338; hypothetical protein.
       0.746
alr1026
Folylpolyglutamate synthase; ORF_ID:alr1026; Belongs to the folylpolyglutamate synthase family.
  
    0.551
alr0277
RNA polymerase sigma-37 factor; ORF_ID:alr0277; Belongs to the sigma-70 factor family.
  
 
 0.496
all3581
ORF_ID:all3581; unknown protein.
  
 
 0.496
all3853
Group 3 sigma 37-type sigma factor; ORF_ID:all3853; Belongs to the sigma-70 factor family.
  
 
 0.496
all1340
ORF_ID:all1340; unknown protein.
       0.487
alr1112
ORF_ID:alr1112; probable transglycosylase.
     
 0.411
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.